Gapemotivo
Nuovo Arrivato
Cittā: Napoli
3 Messaggi |
Inserito il - 26 gennaio 2012 : 08:54:55
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Ho ottenuto con transeq questi frame di lettura,
>,_1 1440 bp. RNIDHRSIDHHRLATSID*HMTAVVGTAEAEPAAKKAAPAKKAAPAAKKAAAPAAAKKAE QKNAGPAETKPKAPEAPRGETDDDEDIELDGDVELEDLEDIDVDEIVAEDDADSEGDSDD DDSDEEPKAADVAAVQKTEEEVLILSDDDDDAPVAQVAAAGATADPVKDYLKQIGKVPLL NAEQEVELAKRIEAGLFAEEQLGGGETDGLPVDVKAELEWIAEDGRRAKNHLLEANLRLV VSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQA RTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELARELDMTPEKVVEVQKYGREPISL HTPLGEEGDSEFGDLIEDSEAIVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTD GQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD*IDR*YYIEKKKKKK >,_2 1440 bp. ETSIIDRSIIID*LHRSTST*PRSWAPLKPSRPPRRRPLPRRPPRRRRRPRHPPPPRRPS RRTLGLPRPSRRRPRPRGARRTTTRTSSSTATWSWRTSRTSTSTRSSRKTTPTPRATPTT TTPTRSPRPPTSPPCRRPRKRSSSSPTTTMTLRWPRWPPPAPPPTR*RTTSSRSARSPCS TPSRRSSWPSASRRACSPRSSWAAARPTGCRSTSRPSWSGSPRTAAAPRTTCWRPTSGSW SRWPSATPAAACSSST*SRKATSA*SGPWRSSTTPRATSSPPTPRGGSGRRSRVPWPTRR GPSASRSTWSK*STSWPESSGRCCRTSAASPRRKSWPASWT*RPRRSSRSRSTAASPSPC TPRWVRRATASSVTSSRTPRPSCRPTPSASRCCRSSCTPFSTRCRNARRASCRCGSASPT VSRRRWTRSARFTGSPVSASARSSRRPCPSCATRPGPRSCATTWTESIDDTTSKKKKKKX >,_3 1440 bp. KHRSSIDRSSSTSYIDRLAHDRGRGHR*SRAGRQEGGPCQEGRPGGEEGRGTRRRQEGRA EERWACRDQAEGARGPAGRDGRRRGHRARRRRGAGGPRGHRRRRDRRGRRRRLRGRLRRR RLRRGAQGRRRRRRAEDRGRGPHPLRRRR*RSGGPGGRRRRHRRPGEGLPQADRQGPPAQ RRAGGRAGQAHRGGPVRRGAAGRRRDRRAAGRRQGRAGVDRRGRPPRQEPPAGGQPPARG LAGQALHRPRHALPRPDPGRQPRPDQGRGEVRLHQGLQVLHLRHVVDPAGDHACHGRPGA DHPHPGPHGRSDQQAGPSPAADAAGPRPRAHAGRAGPRAGHDAREGRRGPEVRPRAHLPA HPAG*GGRQRVR*PHRGLRGHRAGRRRQLHAAAGAAALRSRHAVGTRGGRRVDAVRPHRR SAEDAGRDRQGLRGHP*AHPPDRVEDHVQAAPPVPVPGPARLPGLNRSMILHRKKKKKKX >,_4 1440 bp. FFFFFFFDVVSSIDSVQVVAQDLGPGRVAQLGHGLRLDLADALTGDPVNLADLVQRLRLT VGEAEPHRHDARLAFRQRVENGVQLLLQQREADGVGRHDGLGVLDEVTELAVALLTQRGV QGDGLAAVLLDLDDLLGRHVQLAGQLFRRGLAAEVLQHLPLDSGQLVDHFDHVDRDADGP RLVGHGTRDRLPDPPRGVGGELVALGVVELLHGPDQAEVAFLDQVEEEHAAAGVALGQRD HEPEVGLQQVVLGAAAVLGDPLQLGLDVDRQPVGLAAAQLLLGEQARLDALGQLDLLLGV EQGDLADLLEVVLHRVGGGAGGGHLGHRSVIVVVGEDEDLFLGLLHGGDVGGLGLLVGVV VVGVALGVGVVFRDDLVDVDVLEVLQLHVAVELDVLVVVRLAPRGLGRLRLGLGRPSVLL LGLLGGGGCRGLLRRRGGLLGRGRLLGGRLGFSGAHDRGHVLVDRCS*SMMIDRSMIDVS >,_5 1440 bp. FFFFFFRCSIIDRFSPGSRAGPGTGTGGAAWTWSSTRSGGCAHG*PRKPCRSRPASSADR R*GRTASTRRPPRVPTACRERSAAAPAAA*S*RRRPARWPRSPR*GHRTRCRPPHPAGCA GRWARGRTSGPRRPSRASCPARGPALPAWARGRGPAASAAGLGPAC*SLRPCGPGCGWSA PGRPWHA*SPAGSTTWRRWRTCSPWCSRTSPRP*SGRGCLPGSGRGRACRGRCSAWPARP RAGGWPPAGGSWRGGRPRRSTPARP*RRPAARRSRRRPAAPRRTGPPRCAWPARPPARR* AGGPCRSA*GSPSPGRRWRRRRPPGPPERHRRRRRG*GPLPRSSARRRRRRPWAPRRSRR RRSRPRSRRRLPRRSRRRRCPRGPPAPRRRRARCPRRRPSRPAGPRAPSAWSRQAQRSSA RPSWRRRVPRPSSPPGRPSWQGPPSWRPARLQRCPRPRSCASRSM*LVDDDRSIDDRCFX >,_6 1440 bp. FFFFFFSM*YHRSIQSR*SRRTWDRDGWRSLDMVFDSIWRMRSRVTP*TLPISSSVFG*P SVRPNRIDTTPASRSDSVSRTECSCSCSSVKLTASAGTMASESSMRSPNSLSPSSPSGVC REMGSRPYFWTSTTFSGVMSSSRASSSGVGSRPRSCSICRWTRASLLITSTMWTGMRMVR AWSAMARVIACRIHHVA*VENL*PLV*SNFSTALIRPRLPSWIRSRKSMPRPV*RLASET TSRRLASSRWFLARRPSSAIHSSSALTSTGSPSVSPPPSCSSANRPASMRLASSTSCSAL SRGTLPICLR*SFTGSAVAPAAATWATGASSSSSERMRTSSSVFCTAATSAALGSSSESS SSESPSESASSSATISSTSMSSRSSSSTSPSSSMSSSSSVSPRGASGAFGLVSAGPAFFC SAFLAAAGAAAFFAAGAAFLAGAAFLAAGSASAVPTTAVMC*SIDVASR**SIDR*SMFL
so che l'asterisco indica un segnale di stop, ma poi non ho capito quando il prof dice "se la nostra sequenza nucleotica codifica una proteina, č probabile che questa corrisponda alla piu lunga sequenza amminoacidica contenuta tra due segnali di stop"
help please
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